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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015790930.1_cds_XP_016504563.1_1709
CDS Infomation

[gene=LOC107822511] [db_xref=GeneID:107822511] [protein=probable beta-1,4-xylosyltransferase IRX9H] [protein_id=XP_016504563.1] [location=complement(join(2310..2480,2590..2839,6524..7266))] [gbkey=CDS]
Sequence

ATGGCTTCCATCCGAAGAACTCTATCACCGAATCACGAACGGCATTATCAGAATGGAAAC
CAATCTTCAGTTCAATCGCCATCTCATAAGCTCATTTTAAACGGGAAAAGCTCTTCGATG
CTATATTCTCGGAAAAATTATATATCCATGAAGAAGTTGTTCTATAGGTGTTTGATATTT
TTTTTGCTAGGGTTTATATTAGGTATGGCACCATTTGGTGATTTTGATGATGCGAGGAGC
CGTGATTTTTCCTTTGAGATCAAGCCATCTGTAGTGAATGTTAAGGAGGAGATGAAAGAT
GTGGTCATCCCTAGACCTGATAATGTTGTGGTAAACTCAGTTAAATTACCTGGTAGTTTG
GTGGATGAAGTGAAAGGGAAGTTTGATTATGTACCAAGGAAACTGTTGATTGTGGTGACT
CCAACTTATAATAGGGCACTCCAAGCTTACTATCTTAATAGATTGAGCGAGGTGTTGAAG
ATCGTGAAGTCGCCTCTGTTGTGGATTGTGGTTGAGATGAATGCAGCATCTGCTGAGACT
GCGGACATTTTGAGGAAGACTGGTGTTATGTACCGGCATCTAGTGTGTTCCAAGAACATG
ACGGATATAAAAGACCGCGGGGTGCATCAGAGGAATGTTGCTTTGGAGCATATTGAACAT
CATAGACTCAATGGAATTGTTTACTTCGCAGATGATGATAATATTTACTCCCTTGAGTTG
TTTGAGAGCATTAGATCGATCAATCGTTTTGGCACTTGGCCTGTTGCTATGCTGGCGCAA
AGTAAAAGCAAAGCAACACTGGAGGGCCCTGTGTGTAATGGAAGTCAAGTTATTGGGTGG
CACACTAATGAGAAGAGTAAGCAACTTAGAAGATTCCACGTCGATATGTCTGGCTTTGCC
TTCAATAGCACTATATTATGGGATCCAAAGAAATGGCATCGACCAACTTCAGATCCCATT
CGACAGTTGGACAATGTGAAGGAGGGTTTCCAAGAAACCACATTCATAGAACAAATTGTT
GAAGACGAAAGCCAAATGGAAGGTATCCCCTCTGGTTGCTCAAGGGTATTGAATTGGCAC
CTTCATCTGGAAGCTCATGGACTTGTCTATCCGAGAGCCTGGCTCCTTCAAAAGAACCTT
GATGCCGTTTTCTCTACCACATGA

Peptide Sequence

PEP ID

XP_016504563.1
PEP Infomation

PREDICTED: probable beta-1,4-xylosyltransferase IRX9H [Nicotiana tabacum]
Sequence

MASIRRTLSPNHERHYQNGNQSSVQSPSHKLILNGKSSSMLYSRKNYISMKKLFYRCLIF
FLLGFILGMAPFGDFDDARSRDFSFEIKPSVVNVKEEMKDVVIPRPDNVVVNSVKLPGSL
VDEVKGKFDYVPRKLLIVVTPTYNRALQAYYLNRLSEVLKIVKSPLLWIVVEMNAASAET
ADILRKTGVMYRHLVCSKNMTDIKDRGVHQRNVALEHIEHHRLNGIVYFADDDNIYSLEL
FESIRSINRFGTWPVAMLAQSKSKATLEGPVCNGSQVIGWHTNEKSKQLRRFHVDMSGFA
FNSTILWDPKKWHRPTSDPIRQLDNVKEGFQETTFIEQIVEDESQMEGIPSGCSRVLNWH
LHLEAHGLVYPRAWLLQKNLDAVFSTT

Transcript Sequence

Gene sequence data has not been registered.